Software |

torchEDM

Wed, 16 Sep 2026 00:00:00 +0000

A fork of pyEDM for Empirical Dynamic Modelling that use PyTorch as the backend so that computations are vectorized and run on GPUs. It also adds object-oriented fitters with scikit-learn-like semantics.

It's Complicated

Mon, 23 Mar 2026 00:00:00 +0000

It’s Complicated is a guide and infrastructure for architecting interactive fMRI experiments in Unreal Engine. This forms the basis of my spatial navigation experiment, and work is in progress to provide an in-depth tutorial on how to utilize these plugins to build your own experiments.

Fast-Pairwise

Mon, 15 Jul 2024 00:00:00 +0000

Fast-Pairwise is a parallelized pairwise distance calculator built as a drop-in replacement for the single-threaded scipy.spatial.distance.pdist. It is written in C++ with Python bindings, uses AVX-512 instructions for multi-threaded computation on large 2D NumPy arrays, and supports euclidean, correlation, and random forest distances.

SharpEyes

Sun, 31 Jan 2021 00:00:00 +0000

SharpEyes is a package for eyetracking video analysis and correction to generate retinotopic features. It provides a UI for finding pupils in eyetracking videos, the ability to edit the pupil locations manually to ensure data quality, and tools for making retinotopic videos and motion-energy features out of stimulus videos.