Software

torchEDM

A fork of pyEDM for Empirical Dynamic Modelling that use PyTorch as the backend so that computations are vectorized and run on GPUs. It also adds object-oriented fitters with …

It's Complicated

It’s Complicated is a guide and infrastructure for architecting interactive fMRI experiments in Unreal Engine. This forms the basis of my spatial navigation experiment, and work is …

Fast-Pairwise

Fast-Pairwise is a parallelized pairwise distance calculator built as a drop-in replacement for the single-threaded scipy.spatial.distance.pdist. It is written in C++ with Python …

SharpEyes

SharpEyes is a package for eyetracking video analysis and correction to generate retinotopic features. It provides a UI for finding pupils in eyetracking videos, the ability to …

Contributions

Software that I contribute to but that are not my main projects.

  • PyCortex: Surface visualizations for neuroimaging data
  • cottoncandy: Native python interface for S3